| Johnson Lab > Publications > All
(Updated on Jan 18, 2009
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2006-Present |
| 1 |
An unexpected twist in viral capsid maturation.
Gertsman I, Gan L, Guttman M, Lee K, Speir JA, Duda RL, Hendrix RW, Komives EA, Johnson JE (2009 Apr 2) Nature 458(7238):646-50.
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| 2 |
Reciprocal space representations of helical objects and their projection images for helices constructed from motifs without spherical symmetry.
Lee S, Doerschuk PC, Johnson JE (2009 Feb) Ultramicroscopy 109(3):253-63.
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| 3 |
Evolution of Viral capsid structures - the three domains of life.
Khayat, R., and Johnson, J. E. (2009) In M. A. McKenna and R. McKenna (ed.), Structural Virology, vol. accepted for publication. Royal Society of Chemistry, Cambridge.
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| 4 |
VIPERdb2: an enhanced and web API enabled relational database for structural virology.
Carrillo-Tripp M, Shepherd CM, Borelli IA, Venkataraman S, Lander G, Natarajan P, Johnson JE, Brooks CL 3rd, Reddy VS (2009 Jan) Nucleic Acids Res 37(Database issue):D436-42.
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| 5 |
Characterization of large conformational changes and autoproteolysis in the maturation of a T=4 virus capsid.
Matsui T, Lander G, Johnson JE (2009 Jan) 83(2):1126-34.
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| 6 |
Structure-Based Engineering of an Icosahedral Virus for Nanomedicine and Nanotechnology. In M. Manchester and N. F. Steinmetz (ed.), Viruses as Nanomaterials for Biomedicine and Bioengineering, vol.
Steinmetz, N. F., Lin, T., Lomonossoff, G. P., and Johnson, J. E. (2008) Springer, Heidelberg
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| 7 |
Assembly architecture and DNA binding of the bacteriophage P22 terminase small subunit.
Nemecek D, Lander GC, Johnson JE, Casjens SR, Thomas GJ Jr (2008 Nov 14) J Mol Biol 383(3):494-501.
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| 8 |
Virus capsid expansion driven by the capture of mobile surface loops.
Lee KK, Gan L, Tsuruta H, Moyer C, Conway JF, Duda RL, Hendrix RW, Steven AC, Johnson JE (2008 Oct 8) Structure 16(10):1491-502.
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| 9 |
Bacteriophage lambda stabilization by auxiliary protein gpD: timing, location, and mechanism of attachment determined by cryo-EM.
Lander GC, Evilevitch A, Jeembaeva M, Potter CS, Carragher B, Johnson JE (2008 Sep 10) Structure 16(9):1399-406.
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| 10 |
Multi-disciplinary studies of viruses: the role of structure in shaping the questions and answers.
Johnson JE (2008 Sep) J Struct Biol 163(3):246-53.
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| 11 |
Non enveloped Virus Structure. In B. Mahay and M. van Reganmortel (ed.), Encyclopedia of Virology, Third ed, vol. 5
Speir, J., and Johnson, J. E. (2008) Elsevier, Oxford 380-93.
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| 12 |
Tetravirus structure. In B. Mahay and M. van Reganmortel (ed.), Encyclopedia of Virology, Third ed, vol. 5
Speir, J., and Johnson, J. (2008) Elsevier, Oxford 27-37.
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| 13 |
Principles of Virus Structure. In B. Mahay and M. van Reganmortel (ed.), Encyclopedia of Virology, Third ed, vol. 5
Johnson, J. E., and Speir, J. A. (2008) Elsevier, Oxford 393-401.
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| 14 |
An optimal exposure strategy for cryoprotected virus crystals with lattice constants greater than 1000 Å
Gan, L., and Johnson, J. E. (2008) J. Synchrotron Radiation 15 (Pt 3):223-6.
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| 15 |
Development of Bacteriophage P22 as a Platform for Molecular Display: Genetic and Chemical Modifications of the Procapsid Exterior Surface.
Kang, S., Lander, G., Johnson, J. E., and Prevelige, P. E., Jr. (2008) ChemBioChem 9(4):514-8.
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| 16 |
Rescue of Maturation-defective Flock House Virus Infection with Non-infectious, Mature, Virus-like-particles
Walukiewicz, H. E., Banerjee, M., Schneemann, A., and Johnson, J. E. (2008) J. Virol. 82(4):2025-7.
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| 17 |
The Combination of Chemical Fixation Procedures with High Pressure Freezing and Freeze Substitution Preserves Highly Labile Tissue Ultrastructure for Electron Tomography Applications.
Sosinsky, G. E., Crum, J., Jones, Y. Z., Lanman, J., Smarr, B., Terada, M., Martone, M. E., Deerinck, T. J., Johnson, J. E., and Ellisman, M. H. (2008) J. Struc. Biol 161(3):359-71.
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| 18 |
Visualizing Flock House Virus infection in Drosophila cells with correlated fluorescence and electron microscopy.
Lanman, J., Crum, J., Deerinck, T. J., Gaietta, J. M., Schneemann, A., Sosinsky, G., Ellisman, M. H., and Johnson, J. E. (2008) J. Struc. Biol 161(3):439-46.
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| 19 |
Activation, Exposure and Penetration of Virally Encoded, Membrane-active, Polypeptides during Non enveloped Virus Entry.
Banerjee, M., and Johnson, J. E. (2008) Current Protein and Peptide Science 9(1):16-27.
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| 20 |
The yeast double stranded L-A virus resembles mammalian dsRNA virus cores, p. 105-114. In P. J.T. (ed.)
Wickner, R. B., Tang, J., Gardner, N., and Johnson, J. E. (2007) Segmented Double Strand RNA Viruses: Structure and Molecular Biology. Caister Academic Press, Portland.
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| 21 |
Exact Reduced-Complexity Maximum Likelihood Reconstruction of Multiple 3-D Objects from Unlabeled Unoriented 2-D Projections.
Lee, J., Doerschuk, P. C., and Johnson, J. E. (2007) IEEE Transactions 16:2865-2878.
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| 22 |
Solution NMR Studies of the Maturation Intermediates of a 13 MDa Viral Capsid.
Szymczyna, B. R., Gan, L., Johnson, J. E., and Williamson, J. R. (2007) J Am Chem Soc 129:7867-76.
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| 23 |
DNA packaging and delivery machines in tailed bacteriophages.
Johnson, J. E. and Chiu, W. (2007) Curr Opin Struct Biol 17:237-43.
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| 24 |
Macromolecular mass spectrometry and electron microscopy as complementary tools for investigation of the heterogeneity of bacteriophage portal assemblies.
Poliakov, A., Duijn, E., Lander, G., Fu, C. Y., Johnson, J. E., Prevelige, P. E., Jr., and Heck, A. J. (2007) J Struct Biol 157:371-83.
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| 25 |
An engineered virus as a bright fluorescent tag and scaffold for cargo proteins--capture and transport by gliding microtubules.
Martin, B. D., Soto, C. M., Blum, A. S., Sapsford, K. E., Whitley, J. L., Johnson, J. E., Chatterji, A., and Ratna, B. R. (2006) J Nanosci Nanotechnol 6:2451-60.
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| 26 |
Capsid conformational sampling in HK97 maturation visualized by X-ray crystallography and cryo-EM.
Gan, L., Speir, J. A., Conway, J. F., Lander, G., Cheng, N., Firek, B. A., Hendrix, R. W., Duda, R. L., Liljas, L., and Johnson, J. E. (2006) Structure 14:1655-65.
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| 27 |
Structure of a membrane-binding domain from a non-enveloped animal virus: insights into the mechanism of membrane permeability and cellular entry.
Maia, L. F., Soares, M. R., Valente, A. P., Almeida, F. C., Oliveira, A. C., Gomes, A. M., Freitas, M. S., Schneemann, A., Johnson, J. E., and Silva, J. L. (2006) J Biol Chem 281:29278-86.
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| 28 |
Physical Controls on Directed Virus Assembly at Nanoscale Chemical Templates.
Cheung, C., Chung, S., Chatterji, A., Lin, T., Johnson, J., Hok, S., Perkins, J., and De Yoreo, J. J. (2006) J. Amer. Chem. Soc. 128:10801-7.
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| 29 |
Generation and structural analysis of reactive empty particles derived from an icosahedral virus.
Ochoa, W., Chatterji, A., Lin, T., and Johnson, J. (2006) Chem. Biol. 13:771-8.
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| 30 |
Fluorescent Signal Amplification of Carbocyanine Dyes Using Engineered Viral Nanoparticles.
Soto, C.M., Blum, A.S., Vora, G.J., Lebedev, N., Meador, C.E., Won, A.P., Chatterji, A., Johnson, J.E. and Ratna, B.R. (2006) J. Am. Chem. Soc. 128:5184-5189.
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| 31 |
The structure of an infectious P22 virion shows the signal for headful DNA packaging.
Lander, G. C., Tang, L., Casjens, S. R., Gilcrease, E. B., Prevelige, P., Poliakov, A., Potter, C. S., Carragher, B., and Johnson, J. E. (2006) Science 312:1791-5.
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| 32 |
Highly discriminatory binding of capsid cementing proteins in bacteriophage L.
Tang, L., Gilcrease, E., Casjens, S., and Johnson, J. (2006) Structure, 14:837-45.
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| 33 |
Nanostructured virus crystals for X-ray optics.
Prasad, T., Turner, M., Falkner, J., Mittleman, D., Johnson, J., Lin, T., and Colvin, V. (2006) IEEE Transactions on Nanotechnology 5:93-96.
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| 34 |
The role of subunit hinges and molecular "switches" in the control of viral capsid polymorphism.
Tang, J., Johnson, J. M., Dryden, K., Young, M. J., Zlotnick, A., and Johnson, J. E. (2006) J Struct. Biol., 154:59-67.
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| 35 |
Enhanced Local Symmetry Interactions Globally Stabilize a Mutant Virus Capsid that Maintains Infectivity and Capsid Dynamics.
Speir, J., Bothner, B., Qu, C., Willits, D., Young, M. J., and Johnson, J. E. (2006) J. Virol. 80:3582-91.
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| 36 |
Time-resolved molecular dynamics of HK97 virus maturation interpreted by electron cryo-microscopy and x-ray crystallography.
Wikoff, W., Conway, J., Tang, J., Lee, K., Gan, L., Cheng, N., Duda, R., Hendrix, R., Steven, A., and Johnson, J. (2006) J Struct. Biol.153:300-6.
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| 37 |
VIPERdb: a relational database for structural virology.
Shepherd, C., Borelli, I., Lander, G., Natarajan, P., Siddavanahalli, V., Bajaj, C., Johnson, J., Brooks III, C. L., and Reddy, V. (2006) Nucleic Acids Research, (Database Issue): D386-9.
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| 38 |
Morphological changes in the T=3 capsid of Flock House virus during cell entry.
Walukiewicz, H. E., Johnson, J. E., and Schneemann, A. (2006) J Virol., 80:615-22.
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| 39 |
Preliminary X-ray Characterization of Authentic Providence Virus and Attempts to Express its Coat Protein Gene in Recombinant Baculovirus.
Taylor, D.J., Speir, J., Reddy, V., Cingolani, G., Pringle, F., Ball, L. A., and Johnson, J. (2006) Arch. Virol., 151:155-65.
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2001-2005
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| 40 |
Structure of an archaeal virus capsid protein reveals an evolutionary relationship to eucaryotic and bacterial viruses.
Khayat, R., Tang, L., Young, M. J., and Johnson, J. E. (2005) Proc. Natl. Acad. Sci. (U.S.) 102:18944-9.
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| 41 |
A cowpea mosaic virus nanoscaffold for multiplexed antibody conjugation: Application as an immunoassay tracer.
Sapsford, K. E., Soto, C. M., Blum, A. S., Chatterji, A., Lin, T., Johnson, J. E., Ligler, F. S., and Ratna, B. R. (2005) Biosens Bioelectron 21:1668-73.
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| 42 |
Revised RNA2 sequence of the tetravirus, Nudaurelia capensis omega virus (NomegaV).
du Plessis, L., Hendry, D. A., Dorrington, R. A., Hanzlik, T. N., Johnson, J. E., and Appel, M. (2005) Arch. Virol. 150:2397-402.
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| 43 |
Exploring icosahedral virus structures with VIPER.
Natarajan, P., Lander, G., Shepherd, C., Reddy, V., Brooks III, C. L., and Johnson, J. (2005) Nature Microbiology Reviews, 3:809-817.
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| 44 |
Cooperative Reorganization of a 420 Subunit Virus Capsid.
Lee, K., Tsuruta, H., Hendrix, R., Duda, R., and Johnson, J. (2005) J Mol Biol, 352:723-735.
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| 45 |
An Engineered Virus as a Scaffold for Three-Dimensional Self Assembly on the Nanoscale.
Blum, A., Soto, C., Wilson, C., Brower, T., Pollack, S., Schull, T., Chatterji, A., Lin, T., Johnson, J., Amsinck, C., Franzon, P., Shashidhar, R., and Ratna, B. (2005) Small 1:702-706.
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| 46 |
Structure-derived insights into virus assembly.
Reddy, V., and Johnson, J. (2005) In P. Roy (ed.), Virus Structure and Assembly, vol. 64. Elsevier, Amsterdam. p. 45-68.
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| 47 |
The mechanism of high-pressure-induced ordering in a macromolecular crystal.
Lin, T., Schildkamp, W., Brister, K., Doerschuk, P. C., Somayazulu, M., Mao, H. K., and Johnson, J. E. (2005) Acta Crystallogr D Biol Crystallogr 61:737-43.
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| 48 |
The first crystal structure of a macromolecular assembly under high pressure: CpMV at 330 MPa.
Girard, E., Kahn, R., Mezouar, M., Dhaussy, A. C., Lin, T., Johnson, J. E., and Fourme, R. (2005) Biophys J 88:3562-71.
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| 49 |
Decoration of Discretely Immobilized Cowpea Mosaic Virus with Luminescent Quantum Dots.
Medintz, I. L., Sapsford, K. E., Konnert, J. H., Chatterji, A., Lin, T., Johnson, J. E., and Mattoussi, H. (2005) Langmuir 21:5501-5510.
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| 50 |
Three-dimensional structure of the bacteriophage P22 tail machine.
Tang L, Marion WR, Cingolani G, Prevelige PE and Johnson JE (2005) EMBO J. 24:2087-95.
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| 51 |
Virus crystals as nanocomposite scaffolds.
Falkner, J., Turner, M., Bosworth, J., Trentler, T., Johnson, J., Lin, T., and Colvin, V. (2005) J Am Chem Soc 127:5274-5275.
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| 52 |
A virus-based nanoblock with tunable electrostatic properties.
Chatterji, A., Ochoa, W. F., Ueno, T., Lin, T., and Johnson, J. E. (2005) Nano Lett 5:597-602.
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| 53 |
Maturation of a tetravirus capsid alters the dynamic properties and creates a metastable complex.
Bothner, B., Taylor, D., Jun, B., Lee, K. K., Siuzdak, G., Schlutz, C. P., and Johnson, J. E. (2005) Virology 334:17-27.
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| 54 |
The structural basis of recognition and removal of cellular mRNA 7-methyl G 'caps' by a viral capsid protein: a unique viral response to host defense.
Tang, J., Naitow, H., Gardner, N., Kolesar, A., Tang, L., Wickner, R. B., and Johnson, J. E. (2005) J Mol Recognit 18:158-68.
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| 55 |
Folding and particle assembly are disrupted by single-point mutations near the autocatalytic cleavage site of Nudaurelia capensis omega virus capsid protein.
Taylor, D., and Johnson, J. E. (2005) Protein Sci. 14:401-8.
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| 56 |
Virus stability and protein-nucleic acid interaction as studied by high-pressure effects on nodaviruses.
Schwarcz, W. D., Barroso, S. P., Gomesi, A. M., Johnson, J. E., Schneemann, A., Oliveira, A. C., and Silva, J. L. (2004) Cell Mol Biol (Noisy-le-grand) 50:419-27.
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| 57 |
Natural Supramolecular Building Blocks: Icosahedral Virus Particles Organized by Attached Oligonucleotides.
Strable, E., Johnson, J. E., and Finn, M. G. (2004) Nano Letters 4:1385-1389.
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| 58 |
Heterologous RNA encapsidated in Pariacoto virus-like particles forms a dodecahedral cage similar to genomic RNA in wild-type virions.
Johnson, K. N., Tang, L., Johnson, J. E., and Ball, L. A. (2004) J. Virol. 78:11371-11378.
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| 59 |
Chemical Conjugation of Heterologous Proteins on the Surface of Cowpea Mosaic Virus.
Chatterji, A., Ochoa, W., Shamieh, L., Salakian, S., Wong, S., Clinton, G., Ghosh, P., Lin, T., and Johnson, J. (2004) Bioconjugate Chemistry 15:807-13.
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| 60 |
Virus Particle Explorer (VIPER): A repository of virus capsid structures.
Reddy, V. S., Natarajan, P., Lander, G., Qu, C., Brooks III, C. L., and Johnson, J. E. (2004) In R. H. Cheng and L. Hammar (ed.), Conformational proteomics of macromolecular architecture. World Scientific, Singapore, p. 403-412.
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| 61 |
New addresses on an addressable virus nanoblock; uniquely reactive Lys residues on cowpea mosaic virus.
Chatterji, A., Ochoa, W. F., Paine, M., Ratna, B. R., Johnson, J. E., and Lin, T. (2004) Chem. Biol.11:855-63.
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| 62 |
Evidence that a local refolding event triggers maturation of HK97 bacteriophage capsid.
Lee, K. K., Gan, L., Tsuruta, H., Hendrix, R. W., Duda, R. L., and Johnson, J. E. (2004) J. Mol. Biol. 340:419-33.
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| 63 |
Small compounds targeted to subunit interfaces arrest maturation in a nonenveloped, icosahedral animal virus.
Lee, K. K., Tang, J., Taylor, D., Bothner, B., and Johnson, J. E. (2004) J. Virol. 78:7208-16.
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| 64 |
Control of crosslinking by quaternary structure changes during bacteriophage HK97 maturation.
Gan, L., Conway, J. F., Firek, B. A., Cheng, N., Hendrix, R. W., Steven, A. C., Johnson, J. E., and Duda, R. L. (2004) Mol. Cell 14:559-69.
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| 65 |
Cowpea Mosaic Virus as a Scaffold for 3-D Patterning of Gold Nanoparticles.
Blum, A., Soto, C., Wilson, C., Cole, J., Kim, M., Gnade, B., Chatterji, A., Ochoa, W., Lin, T., Johnson, J., and Ratna, B. (2004) Nano Letters 4:867-870.
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| 66 |
Heterologous expression of the modified coat protein of Cowpea chlorotic mottle bromovirus results in the assembly of protein cages with altered architectures and function.
Brumfield, S., Willits, D., Tang, L., Johnson, J., Douglas, T., and Young, M. J. (2004) J. Gen. Virol. 85:1049-1053.
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| 67 |
The structure of a thermophilic archeal virus shows a dsDNA viral capsid type that spans all domains of life.
Rice, G., Tang, L., Stedman, K., Roberto, F., Johnson, J. E., Douglas, T., and Young, M. J. (2004) Proc. Natl. Acad. Sci.(U.S.) 101:7716-7720.
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| 68 |
Virus Assembly and Maturation.
Johnson, J. (2004) In E. Westhoff and N. Hardy (ed.), Folding and Self Assembly of Macromolecules. World Scientific Publishing Co., Bures-sur-Yvette, France, p 349-374.
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| 69 |
State of the art and prospects of macromolecular crystallography at high hydrostatic pressure.
Fourme, R., Girard, E., Kahn, R., Ascone, I., Mezoua, M., Lin, T., and Johnson, J. (2004) In A. Katrusiak and M. Mac Millan (ed.), High Pressure Crystallography. Kluwer, Dordrecht, p. 527-542.
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| 70 |
Virus structure analysis with synchrotron radiation: methods and results.
Johnson, J. (2004) J. Synchrotron Radiation 11:89-92.
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| 71 |
Nodavirus endopeptidase.
Reddy, V., Schneemann, A., and Johnson, J. (2003) In A. Barret, N. Rawlings, and J. Woessner (ed.), Handbook of Proteolytic Enzymes, 2nd ed. Academic Press Limited, London 964-7.
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| 72 |
Nodavirus coat protein imposes dodecahedral RNA structure independent of nucleotide sequence and length.
Tihova, M., Dryden, K., Harvey, S., Johnson, J., Yeager, M., and Schneemann, A. (2003) J. Virol.78:2897-2905.
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| 73 |
The refined structure of Nudaurelia capensis Omega virus reveals control elements for a T=4 capsid maturation.
Helgstrand, C., Munshi, S., Johnson, J., and Liljas, L. (2003) Virology318:192-203.
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| 74 |
New trends in macromolecular crystallography at high hydrostatic pressure.
Fourme, R., Ascone, I., Kahn, R., Girard, E., Mezoua, M., Lin, T., and Johnson, J. (2003) In R. Winter (ed.), Advances in high pressure biosciences and technology II: Proceedings of the 2 nd International Conference on High Pressure Bioscience and Biotechnology, vol. 2, p 161-170. Springer Verlag, Dortmund.
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| 75 |
Structures of picorna-like plant viruses: implications and applications.
Lin, T., and Johnson, J. (2003) Adv. in Virus Res. 62:167-239.
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| 76 |
A statistical approach to computer processing of cryo electron microscope images: virion classification and 3-D reconstruction.
Yin, Z., Zheng, Y., Doerschuk, P., Natarajan, P., and Johnson, J. (2003) J. Struc. Biol. 144:24-50.
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| 77 |
Crystallization and preliminary crystal analysis of a dsDNA bacteriophage capsid intermediate: Prohead II of HK97.
Wikoff, W., Che, Z., Duda, R., Hendrix, R., and Johnson, J. (2003) Acta Cryst. D 59:2060-2064.
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| 78 |
The refined structure of a protein catenane: the HK97 bacteriophage capsid at 3.44Å reslution.
Helgstrand, C., Wikoff, W., Duda, R., Hendrix, R., Johnson, J., and Liljas, L. (2003) J. Mol. Biol. 334:885-899.
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| 79 |
Using a quasi-parallel X-ray beam of ultra-short wavelength for high pressure virus crystallography ; implications for standard macromolecular crystallography.
Fourme, R., Girard, E., Kahn, R., Ascone, I., Mezouar, M., Dhaussy, A., Lin, T., and Johnson, J. (2003) Acta Cryst. D59:1767-1772.
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| 80 |
Correlation of chemical reactivity of Nudaurelia capensis w virus with a pH-induced conformational change.
Taylor, D., Wang, Q., Bothner, B., Natarajan, P., Finn, M. G., and Johnson, J. (2003) Chem. Comm. 22:2770-2771.
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| 81 |
Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Lin, T., Cavarelli, J., and Johnson, J. E. (2003) Virology 314:26-33.
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| 82 |
An atomic model of a plant reovirus: Rice dwarf virus.
Johnson, J. E. (2003) Structure (Camb) 11:1193-4.
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| 83 |
Virus Particle Dynamics.
Johnson, J. (2003) Adv.Protein.Chem 64:197-218.
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| 84 |
Complementary approaches to structure determination of icosahedral viruses.
Lee, K. K., and Johnson, J. E. (2003) Curr.Opin.Struct.Biol. 13:558-69.
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| 85 |
Nanopatterning the Chemospecific Immobilization of Cowpea Mosaic Virus Capsid.
Smith, J., Lee, K., Wang, Q., Finn, M., Johnson, J., Mrksich, M., and Mirkin, C. (2003) Nano Letters 3:883-886.
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| 86 |
Hybrid Virus-Polymer Materials. 1. Synthesis and Properties of PEG-Decorated Cowpea Mosaic Virus.
Raja, K. S., Wang, Q., Gonzalez, M. J., Manchester, M., Johnson, J. E., and Finn, M. G. (2003) Biomacromolecules 4:472-6.
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| 87 |
Pseudo-Atomic Models of Swollen CCMV From Cryo-Electron Microscopy Data.
Liu, H., Qu, C., Johnson, J., and Case, D. (2003) Struc. Biol. 142:356-63.
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| 88 |
Fabrication of Assembled Virus Nanostructures on Templates of Chemoselective Linkers Formed by Scanning Probe Nanolithography.
Cheung, C. L., Camarero, J. A., Woods, B. W., Lin, T., Johnson, J. E., and De Yoreo, J. J. (2003) J.Am.Chem.Soc. 125:6848-6849.
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| 89 |
Effects of the Cowpea chlorotic mottle bromovirus beta-hexamer structure on virion assembly.
Willits, D., Zhao, X., Olson, N., Baker, T. S., Zlotnick, A., Johnson, J. E., Douglas, T., and Young, M. J. (2003) Virology 306:280-8.
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| 90 |
Cowpea mosaic virus: from the presentation of antigenic peptides to the display of active biomaterials.
Chatterji, A., Burns, L. L., Taylor, S. S., Lomonossoff, G. P., Johnson, J. E., Lin, T., and Porta, C. (2002) Intervirology 45:362-70.
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| 91 |
A General Method to Quantify Quasi-equivalence in Icosahedral Viruses.
Damodaran, K. V., Reddy, V. S., Johnson, J. E., and Brooks, C. L. (2002) J. Mol. Biol. 324:723-37.
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| 92 |
Protein-RNA interactions and virus stability as probed by the dynamics of Tryptophan side chains.
Da Poian, A. T., Johnson, J. E., and Silva, J. L. (2002) J. Biol. Chem. 277:47596-602.
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| 93 |
Preliminary crystallographic analysis of the bacteriophage P22 portal protein.
Cingolani, G., Moore, S., Prevelige, P., and Johnson, J. (2002) J. Struct. Biol. 139:46.
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| 94 |
Opening the High-Pressure Domain beyond 2 kbar to Protein and Virus Crystallography- Technical Advance.
Fourme, R., Ascone, I., Kahn, R., Mezouar, M., Bouvier, P., Girard, E., Lin, T., and Johnson, J. (2002) Structure (Camb) 10:1409.
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| 95 |
Structural Biology of Viruses by the Combination of Electron Cryomicroscopy and X-ray Crystallography.
Tang, L., and Johnson, J. E. (2002) Biochemistry 41:11517-24.
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| 96 |
L-A virus at 3.4 Å resolution reveals particle architecture and mRNA decapping mechanism.
Naitow, H., Tang, J., Canady, M., Wickner, R. B., and Johnson, J. E. (2002) Nat. Struct. Biol. 9:725-8.
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| 97 |
Large-scale, pH-dependent, quaternary structure changes in an RNA virus capsid are reversible in the absence of subunit autoproteolysis.
Taylor, D. J., Krishna, N. K., Canady, M. A., Schneemann, A., and Johnson, J. E. (2002) J. of Virol. 76:9972-80.
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| 98 |
Natural supramolecular building blocks: cysteine-added mutants of cowpea mosaic virus.
Wang, Q., Lin, T., Johnson, J., and Finn, M. (2002) Chemistry and Biology 9:813-819.
|
|
| 99 |
Natural supramolecular buiding blocks:wild type cowpea mosaic virus.
Wang, Q., Kaltgrad, E., Lin, T., Johnson, J., and Finn, M. (2002) Chem. Biol. 9:805-811.
|
|
| 100 |
Virus-like- particles of a fish nodavirus display a capsid subunit domain organization different from insect nodaviruses.
Tang, L., Lin, C., Krishna, N., Yeager, M., Schneemann, A., and Johnson, J. (2002) J. of Virol. 76:6370-6375.
|
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| 101 |
Novel strategy for inhibiting viral entry using a cellular receptor-plant virus chimera.
Khor, I., Lin, T., Langedijk, J., Johnson, J., and Manchester, M. (2002) J. of Virol. 76:4412-4419.
|
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| 102 |
Evolutionary and taxonomic implications of conserved structural motifs between picornaviruses and insect picorna-like viruses.
Liljas, L., Tate, J., Lin, T., Christian, P., and Johnson, J. (2002) Arch of Virol. 147:59-84.
|
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| 103 |
Icosahedral Virus Particles as Addressable Nanoscale Building Blocks.
Wang, Q., Lin, T., Johnson, J., and Finn, M. (2002) Angew. Chem. Int. Ed. 41:459-462.
|
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| 104 |
Complex pattern formation by cowpea mosaic virus nanoparticles.
Fang, J., Soto, C., Lin, T., Johnson, J., and Ratna, B. (2002) Langmuir 18:308-310.
|
|
| 105 |
Omega-like tetraviruses.
Johnson, J., and Canady, M. (2001) p. 1142-1145. In C. Tidona and G. Darai (ed.), The Springer Index of Viruses. Springer Verlag, Heidelberg.
|
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| 106 |
Cricket paralysis-like viruses.
Lin, T., and Johnson, J. (2001) p. 1232-1236. In C. Tidona and G. Darai (ed.), The Springer Index of Viruses. Springer Verlag, Heidelberg.
|
|
| 107 |
Characterization of virus-like-particles assembled in a recombinant baculovirus system expressing the capsid protein of a fish nodavirus.
Lin C, Lu M, Tang L, Liu W, Chao C, Lin C, Krishna N, Johnson J and Schneemann A. (2001) Virology 290:50-58.
|
|
| 108 |
VIrus Particle ExploreR (VIPER): A website for virus capsid structures and their computational analyses.
Reddy V, Natarajan P, Okerberg B, Li K, Damodaran K, Morton R, Brooks III C and Johnson J. (2001) J. of Virology 75:11943-11947.
|
|
| 109 |
Purification, crystallization and preliminary x-ray analysis of L-A: A double stranded RNA virus of yeast.
Naitow H, Canady M, Lin T, Wickner R and Johnson J. (2001) J. Struc. Biol. 135:1-7.
|
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| 110 |
Analysis of Rapid, Large-Scale Protein Quaternary Structural Changes: Time-Resolved X-ray Solution Scattering of Nudaurelia capensis w Virus (NwV) Maturation.
Canady M, Tsuruta H and Johnson J. (2001) J. Mol. Biol. 11:803-814.
|
|
| 111 |
Small-angle X-ray scattering.
Tsuruta H and Johnson J. (2001) In International Table of Crystallography, Volume F, ed. M. Rossmann, E. Arnold, Kluwer Academic Publishers, Dordrecht pp.428-437.
|
|
| 112 |
Virus maturation involving large subunit rotations and local refolding.
Convey J, Wikoff W, Cheng N, Duda R, Hendrix R, Johnson J and Steven A. (2001) Science 292:744-748.
|
|
| 113 |
Viral capsid mobility: A dynamic conduit for inactivation.
Broo K, Wei J, Marshall D, Brown F, Smith TJ, Johnson JE, Schneemann A and Siuzdak G. (2001) Proc. Natl. Acad. Sci. USA 98:2274-2277.
|
|
| 114 |
The structure of pariacoto virus reveals a dodecahedral cage of duplex RNA.
Tang L, Johnson K, Ball L, Lin T, Yeager M and Johnson J. (2001) Nature Struc. Biol. 8:77-83.
|
|
|
1996-2000
|
| 115 |
3D domain swapping modulates the stability of members of an icosahedral virus group.
Qu C, Liljas L, Opalka N, Brugidou C, Yeager M, Beachy R, Fauquet C, Johnson J and Lin T. (2000) Structure Fold Des. 8:1095-1103.
|
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| 116 |
Topologically linked protein rings in the bacteriophage HK97 capsid.
Wikoff W, Liljas L, Duda R, Tsuruta H, Hendrix R and Johnson J. (2000) Science 289:2129-2133.
|
|
| 117 |
Ab initio reconstruction and experimental design for cryo electron microscopy.
Doerschuk P and Johnson J. (2000) IEEE Transactions on Information Theory 46:1714-1729.
|
|
| 118 |
Virus maturation targets the protein capsid to concerted disassembly and unfolding.
Oliveira A, Gomes A, Almeida F, Mohana-Borges R, Valente A, Reddy V, Johnson J and Silva J. (2000) J. Biol. Chem. 275:16037-16043.
|
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| 119 |
Increased resolution data from a large unit cell crystal at a third generation synchrotron x-ray source.
Wikoff W, Schildkamp W and Johnson J. (2000) Acta Cryst. D56:890-893.
|
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| 120 |
Large conformational changes in the maturation of a simple RNA virus, Nudaurelia capensis omega virus.
Canady M, Tihova M, Hanzlik T, Johnson J and Yeager M. (2000) J. Mol. Biol. 299:573-584.
|
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| 121 |
Influence of 3- dimensional structure on the immunogenicity of a peptide expressed on the surface of a plant virus.
Taylor K, Lin T, Porta C, Mosser A, Giesing H, Lomonossoff G and Johnson J. (2000) J. Mol. Recog. 13:71-82.
|
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| 122 |
Structures of Virus and Virus-Like Particles.
Johnson J and Chiu W. (2000) Current Opinion in Structural Biology10:229-235.
|
|
| 123 |
Maturation dynamics of a viral capsid: visualization of transitional intermediate states.
Lata R, Conway JF, Cheng N, Duda RL, Hendrix RW, Wikoff WR, Johnson JE, Tsuruta H and Steven AC. (2000) Cell 100:253-63.
|
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| 124 |
Structural Fingerprinting: Subgrouping of Comoviruses by Structural Studies of Red Clover Mottle Virus to 2.4 Å Resolution and Comparisons with Other Comoviruses.
Lin T, Clark AJ, Chen Z, Shanks M, Dai JB, Li Y, Schmidt T, Oxelfelt P, Lomonossoff GP and Johnson JE. (2000) J. Virol. 74:493-504.
|
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| 125 |
Symmetry-constrained interpolation of viral x-ray crystallography data.
Zheng Y, Doerschuk P and Johnson J. (2000) IEEE Transactions on Signal Processing 48:1-10.
|
|
| 126 |
Supramolecular self-assembly: Molecular dynamics modeling of polyhedral shell formation.
Rapaport D, Johnson J and Skolnick J. (1999) Computer Physics Communications 121:231-235.
|
|
| 127 |
RNA-controlled polymorphism in the in vivo assembly of 180-subunit and 120-subunit virions from a single capsid protein.
Krol MA, Olson NH, Tate J, Johnson JE, Baker TS and Ahlquist P. (1999) Proc. Natl. Acad. Sci. U S A 96:13650-13655.
|
|
| 128 |
The refined crystal structure of cowpea mosaic virus at 2.8 A resolution.
Lin T, Chen Z, Usha R, Stauffacher CV, Dai JB, Schmidt T and Johnson JE. (1999) Virology 265:20-34.
|
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| 129 |
New perspectives on the importance of RNA-protein interactions in nodavirus structure and function.
Schneemann A, Krishna N, Reddy V and Johnson J. (1999) Recent Res. Devel. Virology 1:295-315.
|
|
| 130 |
Principles of Virus Structure.
Johnson J and Speir J. (1999) In Encyclopedia of Virology, 2nd Edition, ed. Granoff, R. Webster, Academic Press Ltd., London pp. 1946-1956.
|
|
| 131 |
The crystal structure of cricket paralysis virus: the first view of a new virus family.
Tate J, Liljas L, Scotti P, Christian P, Lin T and Johnson J. (1999) Nature Structural Biology 6:765-774.
|
|
| 132 |
A highly membrane active peptide in Flock House virus: Implications for the mechanism of nodavirus infection.
Bong D, Steinem C, Janshoff A, Johnson J and Ghadiri M. (1999) Chemistry and Biology 6:473-481.
|
|
| 133 |
An animal derived peptide switches membrane morphology: Possible relevance to nodaviral transfection process.
Janshoff A, Bong D, Steinem C, Johnson J and Ghadiri M. (1999) Biochemistry 38:5328-5336.
|
|
| 134 |
Virus assembly: Imaging a molecular machine.
Wikoff W and Johnson J. (1999) Current Biology 9:296-300.
|
|
| 135 |
Position-dependent processing of peptides presented on the suface of cowpea mosaic virus.
Taylor K, Porta C, Lin T, Johnson J, Barker P and Lomonossoff G. (1999) Biological Chemistry 380:387-392.
|
|
| 136 |
Crystallographic analysis of the dsDNA bacteriophage HK97 mature empty capsid.
Wikoff W, Duda R, Hendrix R and Johnson J. (1999) Acta Cryst. D. D55:763-771.
|
|
| 137 |
Crystallographically identical virus capsids display different properties in solution.
Bothner B, Schneemann A, Marshall D, Reddy V, Johnson J and Siuzdak G. (1999) Nature Structural Biology 6:114-116.
|
|
| 138 |
Pseudomonas aeruginosa outer membrane protein F epitopes are highly immunogenic when expressed on a plant virus.
Brennan F, Jones T, Gilleland L, Bellaby T, Xu F, North P, Thompson A, Staczek J, Lin T, Johnson J, Hamilton W and Gilleland H. (1999) Microbiology 145:211-220.
|
|
| 139 |
Imaging RNA and dynamic protein segments with low resolution virus crystallography: experimental design, data processing and implications of electron density maps.
Tsuruta H, Reddy V, Wikoff W and Johnson J. (1998) J. Mol. Biol. 284:1439-1452.
|
|
| 140 |
Structure determination of Nudaurelia capensis omega virus.
Munshi S, Liljas L and Johnson J. (1998) Acta Cryst. D54:1295-1305.
|
|
| 141 |
Macromolecular assembly: Chainmail stabilization of a viral capsid.
Johnson J and Wikoff W. (1998) Current Biology 8:914-917.
|
|
| 142 |
Antigen expression on the surface of a plant virus for vaccine production.
Spall V, Porta C, Taylor K, Lin T, Johnson J and Lomonossoff G. (1998) In Engineering crops for industrial end uses, ed. P. Shewry, J. Napier, P. Davis. Portland Press. London.
|
|
| 143 |
Biggest virus molecular structure yet (News and Views).
Johnson J and Reddy V. (1998) Nature Structural Biology 5:849-854.
|
|
| 144 |
Structural Studies of Noda and Tetraviruses.
Johnson J and Reddy V. (1998) In The Insect Viruses, ed. L. Miller, L. Ball. Plenum. New York pp. 171-223.
|
|
| 145 |
Nodavirus endopeptidase.
Johnson J and Schneemann A. (1998) In Handbook of Proteolytic Enzymes, ed. A. Barret, N. Rawlings, J. Woessner. Academic Press Ltd. London pp. 964-967.
|
|
| 146 |
Molecular packing in virus crystals: geometry, chemistry and biology.
Natarajan P and Johnson J. (1998) J Structural Biology 121:295-305.
|
|
| 147 |
Particle polymorphism caused by deletion of a peptide molecular switch in a quasi-equivalent icosahedral virus.
Dong X, Natarajan P, Tihova M, Johnson J and Schneemann A. (1998) J. of Virology 72:6024-6033.
|
|
| 148 |
The use of solid physical models for the study of macromolecular assembly.
Bailey M, Schulten K and Johnson J. (1998) Current Opinion in Structural Biology 8:202-208.
|
|
| 149 |
Structural Cell Biology: Functional Integration in Macromolecular Assemblages (Editorial Overview).
Stewart M and Johnson J. (1998) Current Opinion in Structural Biology 8:139-141.
|
|
| 150 |
Comparison of the native CCMV virion with in vitro assembled CCMV virions by cryo-electron microscopy and image reconstruction.
Fox J, Wang G, Speir J, Olson N, Johnson J, Baker T and Young M. (1998) Virology 244:212-218.
|
|
| 151 |
Crystallization and preliminary x-ray analysis of the dsDNA bacteriophage HK97 mature empty capsid.
Wikoff W, Duda R, Hendrix R and Johnson J. (1998) Viorolgy 243:113-118.
|
|
| 152 |
The structure of tobacco ringspot virus: a link in the evolution of icosahedral capsids in the picornavirus superfamily.
Chandrasekar V and Johnson J. (1998) Structure 6:157-171.
|
|
| 153 |
Use of non-crystallographic symmetry for ab initio phasing of virus structures.
Chapman M, Blanc E, Johnson J, McKenna R, Munshi S, Rossmann M and Tsao J. (1998) In Direct methods for solving macromolecular structures, ed. S. Fortier. Kluwer Academic Publishers. The Netherlands pp. 433-442.
|
|
| 154 |
The Structure and Function of Nodavirus Particles: A Paradigm for Understanding Chemical Biology.
Schneemann A, Reddy V and Johnson J. (1998) In Advances in Virus Research, ed. K. Maramorosch, F. Murphy, A. Shatkin. Academic Press. New York pp. 381-346.
|
|
| 155 |
Energetics of quasi-equivalence: computational analysis of protein-protein interactions in icosahedral viruses.
Reddy V, Giesing H, Morton R, Kumar A, Post C, Brooks C and Johnson J. (1998) Biophy. J. 74:546-658.
|
|
| 156 |
Evidence of viral capsid dynamics using limited proteolysis and mass spectrometry.
Bothner B, Dong X, Bibbs L, Johnson J and Siuzdak G. (1998) Journal of Biological Chemistry 273:673-676.
|
|
| 157 |
Partially folded states of the capsid protein of cowpea severe mosaic virus in the disassembly pathway.
Gaspar L, Johnson J, Silva J and Da Poian A. (1997) J. Mol. Biol. 273:456-466.
|
|
| 158 |
Resolution of Space Group Ambiguity and the Structure Determination of Nodamura Virus to 3.3 Å Resolution from Pseudo R32 (monoclinic) Crsytals.
Zlotnick A, Natarajan P, Munshi S and Johnson J. (1997) Acta Cryst. D53:738-746.
|
|
| 159 |
The structure of Alfalfa mosaic virus capsid protein assembled as a T=1 icosahedral particle at 4.0 Å resolution.
Kumar A, Reddy V, Yusibov V, Chipman P, Hatta Y, Fita I, Fukuyama K, Rossmann M, Loesch-Fries L, Baker T and Johnson J. (1997) J. of Virology 71:7911-7916.
|
|
| 160 |
Presentation of heterologus peptides on plant Viruses: genetics, structure and function.
Johnson J, Lin T and Lomonossoff G. (1997) The Annual Review of Phytopathology 35:67-86.
|
|
| 161 |
In Modified Plant Viruses as Vectors: European Patent 0580635.
Lomonossoff G and Johnson J. (1997)
|
|
| 162 |
Crystallographic analysis and cryoelectron microscopy reconstruction of cucumber mosaic virus.
Wikoff W, Tsai C, Wang G, Baker T and Johnson J. (1997) Virology 232:91-97.
|
|
| 163 |
Quasi-equivalent viruses: A Paradigm for Protein Assemblies.
Johnson J and Speir J. (1997) J. Mol. Biol. 269:665-675.
|
|
| 164 |
Packaging and release of the viral genome.
Johnson J and Rueckert R. (1997) In Structural Biology of Viruses, ed. W. Chiu, R. Burnett, R. Garcea. Oxford University Press, Inc. pp. 269-287.
|
|
| 165 |
Principles of virus structure determination.
Baker T and Johnson J. (1997) In Structural Biology of Viruses, ed. R. M. B. a. R. G. (W. Chiu, eds.) Oxford University Press. pp. 38-79.
|
|
| 166 |
Crystallization and preliminary X-ray analysis of tobacco ringspot virus.
Chandrasekar V, Munshi S and Johnson J. (1997) Acta Cryst. D53:125-128.
|
|
| 167 |
Structure-based rationale for the rescue of systemic movement of brome mosaic virus by spontaneous second-site mutations in the coat protein gene.
Flasinski S, Dzianott A, Speir J, Johnson J and Bujarski J. (1997) J. of Virology 71:2500-2504.
|
|
| 168 |
The development of cowpea mosaic virus as a potential source of novel vaccines.
Porta C, Spall V, Lin T, Johnson J and Lomonossoff G. (1996) Intervirology 39:79-84.
|
|
| 169 |
Low resolution meets high: towards a resolution continuum from cells to atoms.
Baker T and Johnson J. (1996) Current Opinion in Structural Biology 6:585-594.
|
|
| 170 |
The 2.8 structure of T=4 animal virus and its implications for membrane translocation of RNA.
Munshi S, Liljas L, Cavarelli W, Bomu W, McKinney B, Reddy V and Johnson J. (1996) J. Mol. Biol. 261:1-10.
|
|
| 171 |
Purification, characterization, assembly and crystallization of assembled alfalfa mosaic virus coat protein expressed in Escherichia coli.
Yusibov V, Kumar A, North A, Johnson J and Loesch-Fries L. (1996) J Gen. Virol 77:567-573.
|
|
| 172 |
Structure-based design of peptide presentation on a viral surface: the crystal structure of a plant/animal virus chimera at 2.8 Å resolution.
Lin T, Porta C, Lomonossoff G and Johnson J. (1996) Fold.Des. 1:179-187.
|
|
| 173 |
Use of macromolecular assemblies as expression systems for peptides and synthetic vaccines.
Lomonossoff G and Johnson J. (1996) Current Opinion in Structural Biology 6:176-182.
|
|
| 174 |
Atomic-Resolution Structural Biology of the Cell: A Progress Report.
Johnson J and Stewart M. (1996) Current Opinion in Structural Biology 6:139-141.
|
|
| 175 |
Functional implications of protein-protein interactions in icosahedral viruses.
Johnson J. (1996) Proc. of the Natl. Acad. of Sci. of the United States of America 93:27-33.
|
|
|
1991-1995
|
| 176 |
The structure determination of Coxsackievirus B3 (CVB3) to 3.5 Å resolution.
Muckelbauer J, Kremer M, Minor I, Tong L, Zlotnick A, Johnson J and Rossmann M. (1995) Acta Cryst. D51:871-887.
|
|
| 177 |
Eukaryotic viral expression systems for polypeptides.
Lomonossoff G and Johnson J. (1995) Seminars in Virology 6:257-267.
|
|
| 178 |
Determination of three-dimensional low-resolution viral structures from solution x-ray scattering.
Zheng Y, Doerschuk P and Johnson J. (1995) Biophysical Journal 69:619-639.
|
|
| 179 |
Crystallization and preliminary X-ray analysis of the cytoplasmic domain of human erythrocyte band 3.
Kiyatkin A, Natarajan P, Munshi S, Minor W, Johnson J and Low P. (1995) Proteins, Structure Function and Genetics 22:293-297.
|
|
| 180 |
Assembly of the T=4 Nudaurelia capensis omega virus capsid protein, post translational cleavage, and specific encapsidation of its mRNA in a baculovirus expression system.
Agrawal D and Johnson J. (1995) Virology 207:89-97.
|
|
| 181 |
Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo electron microscopy.
Speir J, Munshi S, Wang G, Baker T and Johnson J. (1995) Structure 3:63-78.
|
|
| 182 |
A chromatographic analysis of capsid protein isolated from alfalfa mosaic virus: zinc binding and proteolysis cause distinct charge heterogeneity.
Sehnke P and Johnson J. (1994) Virology 204:843-6.
|
|
| 183 |
Direct imaging of interactions between an icosahedral virus and conjugate Fab fragments by cryo-electron microscopy and X-ray crystallography.
Porta C, Wang G, Cheng H, Chen Z, Baker T and Johnson J. (1994) Virology 204:777-788.
|
|
| 184 |
Production and Crystallization of Virus-like Particles Assembled in a Heterologous Protein Expression System.
McKinney B, Agrawal D, Fisher A, Johnson J, Schneemann A and Rueckert R. (1994) Acta Cryst. D50:351-354.
|
|
| 185 |
Differences in pressure stability of the three components of cowpea mosaic virus: implications for virus assembly and disassembly.
Da Poian A, Johnson J and Silva J. (1994) Biochem 33:8339-8346.
|
|
| 186 |
Development of cowpea mosaic virus as a high-yielding system for the presentation of foreign peptides.
Porta C, Spall V, Loveland J, Johnson J, Barker P and Lomonossoff G. (1994) Virology 202:949-955.
|
|
| 187 |
Macromolecular assemblages, Editorial Overview.
Stewart M and Johnson J. (1994) Current Opinion in Structural Biology 4:169-170.
|
|
| 188 |
Capsid assembly in a family of animal viruses primes an autoproteolytic maturation that depends on a single asparatic acid residue.
Zlotnick A, Reddy V, Dasgupta R, Schneemann A, Ray W, Rueckert R and Johnson J. (1994) J. Biol. Chem. 269:13680-13684.
|
|
| 189 |
Comparative studies of T=3 and T=4 icosahedral RNA insect viruses.
Johnson J, Munshi S, Liljas L, Agrawal D, Olson N, Reddy V, Fisher A, McKinney B, Schmidt T and Baker T. (1994) Arch. Virol. (suppl) 9:497-512.
|
|
| 190 |
Functional implications of quasi-equivalence in a T=3 icosahedral animal virus established by Cryo-Electron Microscopy and X-ray Crystallography.
Cheng R, Reddy V, Olson N, Fisher A, Baker T and Johnson J. (1994) Structure 2:271-282.
|
|
| 191 |
Principles in Virus Structure.
Johnson J and Fisher A. (1994) In Encyclopedia of Virology, ed. R. Webster, A. Granoff. Academic Press. London pp. 1573-1586.
|
|
| 192 |
RNA/protein interactions in icosahedral virus assembly.
Fox J, Johnson J and Young M. (1994) Sem. in Virol. 5:51-60.
|
|
| 193 |
The Refined three-dimensional Structure of an Insect Virus at 2.8 Å Resolution.
Wery J, Reddy V, Hosur M and Johnson J. (1994) J. Mol. Biol. 235:565-586.
|
|
| 194 |
Insertion of Foreign Antigenic Sites into the Plant Virus Cowpea Mosaic Virus.
Lomonossoff G, Rohll J, Spall V, Maule A, Loveland J, Porta C, Usha R and Johnson J. (1993) Protein Engineering II,. Proceedings of the Second AFRC Protein Engineering Conference,130-138.
|
|
| 195 |
A Monoclinic Crystal with R32 Pseudo-Symmetry: A Preliminary Report of Nodamura Virus Structure Determination.
Zlotnick A, McKinney B, Munshi S and Johnson J. (1993) Acta Crystallogr. D49:580-587.
|
|
| 196 |
Raman dynamic probe of hydrogen exchange in bean pod mottle virus: base- specific retardation of exchange in packaged ssRNA.
Li T, Johnson J and Thomas G, Jr. (1993) Biophys J 65:1963-72.
|
|
| 197 |
Expression of an animal virus antigenic site on the surface of a plant virus particle.
Usha R, Rohll J, Spall V, Shanks M, Maule A, Johnson J and Lomonossoff G. (1993) Virology 197:366-374.
|
|
| 198 |
Crystallization and preliminary X-ray characterization of tobacco streak virus and a proteolytically modified form of the capsid protein.
Sehnke P and Johnson J. (1993) Virology 196:328-31.
|
|
| 199 |
Use of Recombinant baculovirus in synthesis of morphologically distinct virus-like particles of Flock House Virus, a Nodavirus.
Schneemann A, Dasgupta R, Johnson J and Rueckert R. (1993) J. of Virol. 67:2756-2763.
|
|
| 200 |
Crystallization of Virus-like Particles Assembled from Flock House Virus Coat Protein Expressed in a Baculovirus System..
Fisher A, McKinney B, Schneemann A, Rueckert R and Johnson J. (1993) J. of Virol. 67:2950-2953.
|
|
| 201 |
Preliminary x-ray data analysis of crystalline cowpea chlorotic mottle virus.
Speir J, Munshi S, Baker T and Johnson J. (1993) Virology193:234-241.
|
|
| 202 |
Ordered duplex RNA controls capsid architecture in an icosahedral animal virus.
Fisher A and Johnson J. (1993) Nature 361:176-179.
|
|
| 203 |
Sequence and Analysis of the Capsid Protein of Nudaurelia capensis w Virus, an Insect Virus with T=4 Icosahedral Symmetry.
Agrawal D and Johnson J. (1992) Virology 190:806-814.
|
|
| 204 |
Crystallization and preliminary data analysis of Flock House virus.
Fisher A, McKinney B, Wery J and Johnson J. (1992) Acta. cryst. B48:515-520.
|
|
| 205 |
Conformations, interactions, and thermostabilities of RNA and proteins in bean pod mottle virus: investigation of solution and crystal structures by laser Raman spectroscopy.
Li T, Chen Z, Johnson J and Thomas G, Jr. (1992) Biochemistry 31:6673-6682.
|
|
| 206 |
Identification of a Fab Interaction Footprint Site on an Icosahedral Virus by Cryo-electron Microscopy and X-ray Crystallography.
Wang G, Porta C, Chen Z, Baker T and Johnson J. (1992) Nature 355:275-278.
|
|
| 207 |
Comoviruses and enteroviruses share a T cell epitope.
Beck M, Tracy S, Coller B, Chapman N, Johnson J and Lomonossoff G. (1992) Virology 186:238-246.
|
|
| 208 |
Comovirus capsid proteins: synthesis, structure, and evolutionary implications.
Lomonossoff G, Shanks M, Holness C, Maule A, Evans D, Chen Z, Stauffacher C and Johnson J. (1991) In Biochemistry and Molecular Biology of Plant-Pathogen Interactions, ed. e. (C. J. Smith, Clarendon Press, Oxford,. pp. 76-91.
|
|
| 209 |
Viruses getting their heads together.
Johnson J. (1991) Current Biology 1:287-289.
|
|
| 210 |
The synthesis and structure of comovirus capsids.
Lomonossoff G and Johnson J. (1991) Prog. Biophys. Molec. Biol. 55:107-137.
|
|
| 211 |
Crystallization and Preliminary Structure Analysis of an Insect Virus with T=4 Quasi-symmetry: Nudaurelia Capensis w Virus.
Cavarelli J, Bomu W, Liljas L, Kim S, Minor W, Munshi S, Muchmore S, Schmidt T and Johnson J. (1991) Acta Crystallogr. B47:23-29.
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|
|
1986-1990
|
| 212 |
Capsid structure and RNA packaging in comovirus.
Chen Z, Stauffacher C and Johnson J. (1990) Sem. in Virol. 1:453-466.
|
|
| 213 |
The three-dimensional structure of frozen-hydrated Nudaurelia capensis beta virus, a T = 4 insect virus.
Olson N, Baker T, Johnson J and Hendry D. (1990) J Struct Biol 105:111-22.
|
|
| 214 |
Virus Crystallography Using Synchrotron X-ray Radiation.
Johnson J and Chen Z. (1990) In American Institute of Physics Conference Proceedings 215: X-ray and Inner-Shell Processes, ed. M. O. K. a. S. T. M. (T. A. Carlson, eds.) American Institute of Physics, New York,. Knoxville, TN pp. 863-877.
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| 215 |
Structural homology among four nodaviruses as deduced by sequencing and X-ray crystallography.
Kaesberg P, Dasgupta R, Sgro J, Wery J, Selling B, Hosur M and Johnson J. (1990) . Mol. Biol. 214:423-435.
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| 216 |
RNA Packaging in Bean Pod Mottle Virus.
Chen Z, Stauffacher C, Schmidt T, Fisher A and Johnson J. (1990) Positive Strand RNA Virus, ed. e. (M. A. Brinton and F. X. Heinz. Amer. Soc. Microbiol. Press. Washington, D.C. pp. 218-226.
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| 217 |
Structural Studies of Bean Pod Mottle Virus, Capsid, and RNA in Crystal and Solution States by Laser Raman Spectroscopy.
Li T, Chen Z, Johnson J and Thomas G. (1990) Biochem. 29:5018-5026.
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| 218 |
Molecular Biology at Atomic Resolution: The Structure of an Insect Virus and its Functional Implications.
Wery J and Johnson J. (1989) Anal. Chem. 61:1341A-1350A.
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| 219 |
Quaternary and tertiary structures of isometric RNA viruse.
Johnson J, Chen Z, Li Y, Schmidt T, Stauffacher C, Wery J, Hosur M and Sehnke P. (1989) In Synchrotron Radiation in Structural Biology, ed. R. M. W. Sweet, A. D. Plenum Press. New York pp. 141-159.
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| 220 |
Crystallographic structure of an RNA helix:[U(UA)6A]2.
Dock-Bregeon A, Chevrier B, Podjarny A, Johnson J, deBear J, Gough G, Gilham P and Moras D. (1989) J. Mol. Biol. 209:459-474.
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| 221 |
Protein-RNA Interactions in an Icosahedral Virus at 3.0 Å Resolution.
Chen Z, Stauffacher C, Li Y, Schmidt T, Bomu W, Kamer G, Shanks M, Lomonossoff G and Johnson J. (1989) Science 245:154-159.
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| 222 |
The Structure and Function of Small, Isometric, RNA Viruses.
Johnson J, Chen Z, Li Y, Schmidt T, Stauffacher C, Wery J, Hosur M and Sehnke P. (1989) Proc. 8th Intl. Biotech. Symposium259-269.
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| 223 |
Icosahedral RNA virus structure.
Rossmann M and Johnson J. (1989) Ann. Rev. Biochem. 58:533-573.
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| 224 |
Crystal Structure of a Kinked RNA.
Dock-Bregeon A, Chevrier B, Podjarny A, Moras D, deBear J, Gough G, Gilham P and Johnson J. (1989) In Molecular Biology of RNA, ed. Alan R. Liss, Inc. pp. 1-11.
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| 225 |
A "zinc-finger"-type binding domain in tobacco streak virus coat protein.
Sehnke P, Mason A, Hood S, Lister R and Johnson J. (1989) Virology 168:48-56.
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| 226 |
High resolution structure of the RNA duplex [U(U-A)6A]2.
Dock-Bregeon A, Chevrier B, Podjarny A, Moras D, deBear J, Gough G, Gilham P, Johnson J. (1988) Nature 335:375-8.
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| 227 |
Crystallization of viruses and virus proteins..
Sehnke P, Harrington M, Hosur M, Li Y, Usha R, Tucker R, Bomu W, Stauffacher C and Johnson J. (1988) J. Crystal Growth 90:222-230.
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| 228 |
Structure of an Insect Virus at 3.0 Å Resolution.
Hosur M, Schmidt T, Tucker R, Johnson J, Gallagher T, Selling B and Rueckert R. (1987) Proteins 2:167-176.
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| 229 |
The Structure of a Common Cold, Human Rhinovirus 14.
Arnold E, Vriend G, Luo M, Griffith J, Kamer G, Erickson J, Johnson J and Rossmann M. (1987) Acta Cryst. A43:346-361.
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| 230 |
The structure of cowpea mosaic virus at 3.5 Å resolution.
Stauffacher C, Usha R, Harrington M, Schmidt T, Hosur M and Johnson J. (1987) In Crystallography in Molecular Biology, ed. D. Moras, J. Drenth, G. Strandberg, D. Suck & K. Wilson. Plenum Press. New York & London pp. 293-308.
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| 231 |
Multilayered Vesicles Prepared by Reverse Phase Evaporation: Liposome Structure and Optimum Solute Entrapment.
Pidgeon C, McNeely S, Schmidt T and Johnson J. (1987) Biochemistry 26:17-29.
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1981-1985
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| 232 |
Structure of a human common cold virus and functional relationship to other picornaviruses.
Rossmann M, Arnold E, Erickson J, Frankenberger E, Griffith J, Hecht H, Johnson J, Kamer G, Luo M, Mosser A, Rueckert R, Sherry B and Vriend G. (1985) Nature (London) 317:145-153.
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| 233 |
Antibody Binding to Cowpea Mosaic Virus in the Crystalline State.
Johnson J and Harrington M. (1985) In The Immune Recognition of Protein Antigens, ed. W. Laver, G. Air. Cold Spring Harbor Press. pp. 169-173.
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| 234 |
Virus Particle and Stability-Tricorna Viruses.
Johnson J and Argos P. (1985) In The Viruses, ed. F.-C. a. Wagner. Plenum Press. New York pp. 19-56
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| 235 |
1H, 13C and 31P Nuclear Magnetic Resonance Studies of Cowpea Mosaic Virus: Detection and Exchange of Polyamines and Dynamics of the RNA.
Virudachalam R, Harrington M, Johnson J and Markley J. (1985) Virology 141:43-50.
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| 236 |
Patterson Methods and Protein Applications.
Johnson J. (1984) In Computational Crystallography, ed. S. Hall. Oxford University Press. pp. 67-81.
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| 237 |
Macromolecular Crystallography with Synchrotron Radiation: Collection and Processing of Data from Crystals with a very Large Unit Cell.
Usha R, Johnson J, Moras D, Thierry J, Fourme R and Kahn R. (1984) J. Appl. Cryst. 17:147-153.
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| 238 |
Black Beetle Virus - Crystallization and Particle Symmetry.
Hosur M, Schmidt T, Tucker R, Johnson J, Selling B and Rueckert R. (1984) Virology 133:119-127.
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| 239 |
Chemical stability in simple spherical plant viruses.
Argos P and Johnson J. (1984) In Biological Macromolecules and Assemblies, ed. F. A. A. M. Jurnak. Wiley & Sons. New York pp. 1-43.
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| 240 |
The structure of a T=1 aggregate of alfalfa mosaic virus coat protein at 4.5 Å resolution.
Fukuyama K, Abdel-Meguid S, Johnson J and Rossmann M. (1983) J. Mol. Biol. 167:873-894.
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| 241 |
The spherically averaged structures of cowpea mosaic virus components by X-ray solution scattering.
Schmidt T, Johnson J and Phillips W. (1983) Virology 127:65-73.
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| 242 |
Virus Structure and Crystallography: An Historical Perspective.
Johnson J. (1983) In Crystallography in North America, ed. D. McLachlan, J. Glusker, H. Steinfink. Aldinger Publishing Co. Lansing, MI. pp. 412-415.
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| 243 |
A description of techniques used in the structure determination of southern bean mosaic virus at 2.8 Å resolution.
Abad-Zapatero C, Abdel-Meguid S, Johnson J, Leslie A, Rayment I, Rossmann M, Suck D and Tsukihara T. (1981) Acta Crystallogr. B37:2002-2018.
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| 244 |
Crystallographic studies of cowpea mosaic virus by electron microscopy and X-ray diffraction.
Johnson J, Hollingshead C. (1981) J. Ultrastruct. Res. 74:223-231.
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| 245 |
Southern bean mosaic virus at 2.8 Å resolution.
Abad-Zapatero C, Abdel-Meguid S, Johnson J, Leslie A, Rayment I, Rossmann M, Suck D and Tsukihara T. (1981) In Structural Aspects of Recognition and Assembly in Biological Macromolecules, ed. M. Balaban, J. Sussman, W. Traub, A. Yonath. Balaban ISS. Rehovot and Philadelphia.
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1976-1980
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| 246 |
Structure of southern bean mosaic virus at 2.8 Å resolution.
Abad-Zapatero C, Abdel-Meguid S, Johnson J, Leslie A, Rayment I, Rossmann M, Suck D and Tsukihara T. (1980) Nature (London) 286:33-39.
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| 247 |
Crystalline cowpea mosaic virus.
White J and Johnson J. (1980) Virology 101:319-324.
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| 248 |
Structure of Lobster Apo-D-glyceraldehyde-3-phosphate dehydrogenase at 3.0 Å resolution.
Murthy M, Garavito R, Johnson J and Rossmann M. (1980) J. Mol. Biol. 138:859-872.
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| 249 |
The structure of southern bean mosaic virus at 5 Å resolution.
Rossmann M, Johnson J, Suck D, Rayment I and Leslie A. (1980) In Biomolecular Structure, Conformation, Function and Evolution, ed. O. a. N. Y. Pergamon Press. Diffraction and Relation Studies (R. Srinivasan).
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| 250 |
Metal-free southern bean mosaic virus crystals.
Rayment I, Johnson JE, and Rossmann MG (1979) J Biol Chem. 254:5243-5.
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| 251 |
The structure of southern bean mosaic virus at 5 Å resolution.
Suck D, Rayment I, Johnson J and Rossmann M. (1978) Virology 85:187-197.
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| 252 |
An 11Å resolution electron density map of southern bean mosaic virus.
Rayment I, Johnson J, Suck D, Akimoto T and Rossmann M. (1978) Acta Crystallogr. B34:567-578.
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| 253 |
A method for preventing crystal slippage in macromolecular crystallogrphy.
Rayment I, Johnson J and Suck D. (1977) J. Appl. Cryst. 10:365.
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| 254 |
Crystalline cowpea chlorotic mottle virus.
Rayment I, Argos P and Johnson J. (1977) J. Ultrastruc. Res. 61:240-242.
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| 255 |
A four-helical super-secondary structure.
Argos P, Rossmann M and Johnson J. (1977) Biochem. & Biophys. Res. Comm. 75:83-86.
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| 256 |
The structure of southern bean mosaic virus at 22.5 Å resolution.
Johnson J, Akimoto T, Suck D, Rayment I and Rossmann M. (1976) Virology 75:394-400.
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1971-1975
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| 257 |
Rotation function studies of southern bean mosaic virus at 22 Å resolution.
Johnson J, Argos P and Rossmann M. (1975) Acta Crystallogr. B31:2577-2583.
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| 258 |
The packing of southern bean mosaic virus in various crystal cells.
Akimoto T, Wagner M, Johnson J and Rossmann M. (1975) Ultrastruct. Res. 53:306-318.
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| 259 |
Single crystal X-ray diffraction studies of southern bean mosaic virus.
Johnson J, Rossmann M, Smiley I and Wagner M. (1974) J. Ultrastruct. Res. 46:441-451.
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| 260 |
The crystal and molecular structure of di-(2-pyridyl)amine.
Johnson J and Jacobson R. (1973) Acta Cryst. B29:1669-1674.
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| 261 |
Crystal and molecular structure of di[iodobis-(2,2'-bipyridylamine)-copper(11)] iodide perchlorate.
Johnson J and Jacobson R. (1973) J. Chem. Soc. 580-584.
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| 262 |
Crystal and molecular structure of bis-(2,2-bipyridylamine)copper(11) perchlorate.
Johnson J, Beineke T and Jacobson R. (1971) J. Chem. Soc. (A):1371-1374.
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